PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00454g00323.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family MYB_related
Protein Properties Length: 580aa    MW: 60489 Da    PI: 9.3482
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00454g00323.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.41.4e-07174219145
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHH CS
           Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwq 45 
                               r++W+  Ed  l+ av++ G g+W+ I +      Rt  q+  rw 
  Peaxi162Scf00454g00323.1 174 RKPWSDAEDMELIAAVQKCGEGNWANILKGDFkGDRTTSQLSQRWA 219
                               789************************9742224888888888885 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.718169226IPR017930Myb domain
Gene3DG3DSA:1.10.10.605.0E-13170225IPR009057Homeodomain-like
SuperFamilySSF466895.1E-12171224IPR009057Homeodomain-like
SMARTSM007177.8E-9173224IPR001005SANT/Myb domain
PfamPF002493.1E-6174220IPR001005SANT/Myb domain
CDDcd116605.67E-15175223No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 580 aa     Download sequence    Send to blast
MTVLTLLQEV AQVQDLKFDW DELVKKTTTG ITNAREYQML WRHLAYRHGL LDKLDDSAQP  60
MDDDSDLEYE LEALPPVSNE ASVEAAACVK VLIASGVPCD SDMPNENTVE APLTINIPNG  120
QTSRTGTDNS LNGTSVYGTK ITVPVTVPLP SVKAAEGLDT NGPASATFPA RRKRKPWSDA  180
EDMELIAAVQ KCGEGNWANI LKGDFKGDRT TSQLSQRWAT IRKRHGNTIG NGSQLSEAQL  240
AARHAMSMAL GDNLRAACPI STNAGPNVGG APSKSSHFAA AGNASGGPKS EHQQDLVPPK  300
PRVIPKIPST KPAISPDSMV KAAAVAAGAR ISTPAGASSL QNAALSKKVV HIMPGGTPAV  360
KSSVPGSTTG LPSNVHFIRT GLVSCPAGPS NASPSGPQQL PGQPHSLRPA SPAVQLNSAA  420
ATSRAHASSG VRGAPTSSPV TVLEVKTKVA TVQQNHTAVL SNKRNEKVEV NRAASKGNTP  480
QLQVLKDQTA ASGNLLAEKV EGKTLTSGDA VIEHGGKSKT SRIQVQEKLI IGLEAASSNS  540
IGKQGQASNK NENTKIDLTV ENSSVQGPAP ETCKKPFEGS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009795383.10.0PREDICTED: uncharacterized protein LOC104242090
RefseqXP_016460255.10.0PREDICTED: uncharacterized protein LOC107783722
TrEMBLK4BU740.0K4BU74_SOLLC; Uncharacterized protein
STRINGSolyc04g076360.2.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA34342237
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09710.13e-75MYB_related family protein